PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509817.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 375aa    MW: 43160.4 Da    PI: 6.9384
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.72.8e-15194237755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       Er+RR+riN+++++Lr+l+P+      +K++ a+iLe A+eYIk+Lq
  XP_004509817.1 194 VTERNRRKRINKGLFTLRSLVPNI-----TKMDRAAILEDAIEYIKELQ 237
                     57*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.0E-910117IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088815.783187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-16189251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.17E-13190240No hitNo description
SMARTSM003533.0E-15193242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-13194237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-16194251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00299310372No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MSGMRVVEWL RPLVETKAWD YVVVWKYGND PTRFIEWMGC CCGGGNIEHV KFEEKMDDEQ  60
YNLGPICRDT LFYHPVRTKS CEALAKFPFS ISLYSSVHGE VAISQQPRWL IQQIPKDINM  120
MEFISAHFCV SINQEAISEQ SYTNRNFNDH YTLTPSIEGL SSGSNPSTEH SKGEDKEKLV  180
REPQKEVYHA KNLVTERNRR KRINKGLFTL RSLVPNITKM DRAAILEDAI EYIKELQKQE  240
IKLQEEVKAL EVEDCEKNTL QLRVKTEKEQ AKGTRSLPLI ELNQSSSDST RKTKMKLQVE  300
VNHIGGTEFL IKLCCEQKKG GFSRLMEAIH SFGLHVVHAN MITFDGIVSN NLMVEATEQD  360
IHPMKLREYL IQQTG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509817.10.0PREDICTED: transcription factor ABORTED MICROSPORES isoform X2
TrEMBLA0A072U2K10.0A0A072U2K1_MEDTR; BHLH transcription factor
STRINGGLYMA08G39470.21e-147(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.19e-50bHLH family protein